Monday 7 April 2008

Webservices

Initially I thought today was not going to be such a productive day. However, I have now managed to set up an online web server http://edcannon.hobby-site.com/CDKDescriptorCalculation.html) that can calculate descriptors from the Chemistry Development Kit given a smile string as input. The descriptors that have been implemented at present are:
  • BCUT
  • Fingerprint
  • Apol
  • Number of aromatic atoms
  • Autocorrelation descriptor with polarisability
  • Number of hydrogen bond acceptors
  • Number of hydrogen bond donors
  • Lipinski's rule of 5
  • Total polar surface area
  • XlogP
More descriptors will be made available later. I also intend to put an online service for machine learning algorithms in using the Open Source WEKA Java library.

Off to bed.

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